Polyacrylamide gel electrophoreis (PAGE)

A form of chromatography in which molecules are separated on the basis of size and charge. The stationary phase (the polyacrylamide gel) is a polymerized version of acrylamide monomers. The gel looks and feels like Jello™. On a molecular basis it consists of an intertwined and cross-linked mesh of polyacrylamide strings. As can be imaged, there are holes in the gel (like in a plastic mesh bag) and with enough cross-linking the size of the holes begins to approach the size of the molecules which are to be separated. Since some molecules will be larger and some smaller, some of them will be able to pass through the gel matrix more easily than others. This is part of the basis for separation. It should be noted at this point that if the gel is cross-linked enough and because of this the holes in that gel are smaller than the molecules to be separated, then the molecules will not be able to penetrate into the gel and no separation can occur. The charge on the molecule also plays a role in the separation. Functionally, the gel serves to hold and separate the molecules. Although details are not presented here, after the gel has been prepared (poured and cross-linked) a small amount of the solution containing the molecules to be separated is placed into wells (grooves to hold the liquid) on the gel and the system is subjected to an electric current. Over the course of minutes to hours molecules bearing different charge/mass separate.


 


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